Result of the regulome DB with SNPs in the
| Gene | SNP | BP | A1 | A2 | Regulome | ||||
|---|---|---|---|---|---|---|---|---|---|
| Score | TFBS | DNase | Proteins bound | Motifs | |||||
| rs7990344 | 78957081 | C | T | 3a | + | + | TCF12, HNF4A, ATF3, POLR2A, FOSL2, SIN3A, CREB1, ASH2L, EP300 | TP73 | |
| rs7339303 | 78988866 | A | G | 3a | + | + | GATA1, ZMYM3 | NANOG, RARA | |
| rs1475797 | 78991826 | A | C | 3a | + | + | SPI1 | HOXA10, HOXA11, HOXA13, HOXC12, HOXC13, HOXD10, HOXD11, HOXD12, HOXD13, PDX1, POU2F1, POU2F2 | |
| rs2783122 | 79001279 | G | A | 3a | + | + | ZSCAN5C, HEK293T, HEK293 | AIRE | |
| rs1408049 | 79011653 | G | C | 3a | + | + | ZBTB17 | FOXD2 | |
| rs987284 | 79021985 | C | A | 3a | + | + | ZNF189, GATA2, RCOR1, EP300, GATA3 | SPIC | |
Abbreviations: BP, base pair; A1, minor allele; A2, major allele; TFBS, transcription factor binding site.
